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Radgocitabine
Also known as: 135598-68-4, Tas-109, Radgocitabine, (2r,3s,4s,5r)-2-(4-amino-2-oxopyrimidin-1-yl)-4-hydroxy-5-(hydroxymethyl)oxolane-3-carbonitrile, Tas 109, 00m634hd2v
Molecular Formula
C10H12N4O4
Molecular Weight
252.23  g/mol
InChI Key
DCYBPMFXJCWXNB-JWIUVKOKSA-N
FDA UNII
00M634HD2V

Radgocitabine is an analogue of the nucleoside deoxycytidine with potential antineoplastic activity. Upon administration, radgocitabine is incorporated into DNA and directly inhibits the activity of DNA polymerase, which may result in inhibition of DNA replication and cell cycle arrest in the S and G2/M phases, DNA fragmentation, and tumor cell apoptosis.
1 2D Structure

Radgocitabine

2 Identification
2.1 Computed Descriptors
2.1.1 IUPAC Name
(2R,3S,4S,5R)-2-(4-amino-2-oxopyrimidin-1-yl)-4-hydroxy-5-(hydroxymethyl)oxolane-3-carbonitrile
2.1.2 InChI
InChI=1S/C10H12N4O4/c11-3-5-8(16)6(4-15)18-9(5)14-2-1-7(12)13-10(14)17/h1-2,5-6,8-9,15-16H,4H2,(H2,12,13,17)/t5-,6+,8-,9+/m0/s1
2.1.3 InChI Key
DCYBPMFXJCWXNB-JWIUVKOKSA-N
2.1.4 Canonical SMILES
C1=CN(C(=O)N=C1N)C2C(C(C(O2)CO)O)C#N
2.1.5 Isomeric SMILES
C1=CN(C(=O)N=C1N)[C@H]2[C@H]([C@@H]([C@H](O2)CO)O)C#N
2.2 Other Identifiers
2.2.1 UNII
00M634HD2V
2.3 Synonyms
2.3.1 MeSH Synonyms

1. 2'-cyano-2'-deoxyarabinofuranosylcytosine

2. 2'-cyano-2'deoxy-1-beta-d-arabinofuranosylcytosine

2.3.2 Depositor-Supplied Synonyms

1. 135598-68-4

2. Tas-109

3. Radgocitabine

4. (2r,3s,4s,5r)-2-(4-amino-2-oxopyrimidin-1-yl)-4-hydroxy-5-(hydroxymethyl)oxolane-3-carbonitrile

5. Tas 109

6. 00m634hd2v

7. 2'-cyano-2'-deoxy-1-(beta-d-arabinofuranosyl)cytosine

8. (2r,3s,4s,5r)-2-(4-amino-2-oxopyrimidin-1(2h)-yl)-4-hydroxy-5-(hydroxymethyl)tetrahydrofuran-3-carbonitrile

9. Unii-00m634hd2v

10. Radgocitabine [who-dd]

11. Radgocitabine [inn]

12. Chembl337450

13. Schembl1006241

14. Dtxsid30159474

15. Chebi:145435

16. Dfp10917

17. Ex-a1611

18. Hy-16445a

19. 4-amino-l-(2-cyano-2-deoxy-beta-d-arabinofuranosyl)- 2(1h)-pyrimidinone

20. Akos030573293

21. Cs-6837

22. Db11667

23. Ns00069241

24. A857813

25. 1-(2-deoxy-2-cyano-beta-d-arabinofuranosyl)cytosine

26. Q27231358

27. 1-(2-c-cyano-2-deoxy-beta-d-arabino-pentofuranosyl) Cytosine

28. 2'-c-cyano-2'-deoxy-1-beta-d-arabino-pentofuranosyl-cytosine

29. 2'-cyano-2'-deoxy-1-(.beta.-d-arabinofuranosyl)cytosine

30. 4-amino-1-(2-cyano-2-deoxy-beta-d-arabinofuranosyl)pyrimidin-2(1h)-one

31. 2(1h)-pyrimidinone, 4-amino-1-(2-cyano-2-deoxy-.beta.-d-arabinofuranosyl)-

32. 4-amino-l-(2-cyano-2-deoxy-.beta.-d-arabinofuranosyl)- 2(1h)-pyrimidinone

33. (2r,3s,4s,5r)-2-(4-amino-2-oxopyrimidin-1(2h)-yl)-4-hydroxy-5-(hydroxymethyl)-tetrahydrofuran-3-carbonitrile

2.4 Create Date
2005-08-08
3 Chemical and Physical Properties
Molecular Weight 252.23 g/mol
Molecular Formula C10H12N4O4
XLogP3-2.4
Hydrogen Bond Donor Count3
Hydrogen Bond Acceptor Count5
Rotatable Bond Count2
Exact Mass g/mol
Monoisotopic Mass g/mol
Topological Polar Surface Area132
Heavy Atom Count18
Formal Charge0
Complexity466
Isotope Atom Count0
Defined Atom Stereocenter Count4
Undefined Atom Stereocenter Count0
Defined Bond Stereocenter Count0
Undefined Bond Stereocenter Count0
Covalently Bonded Unit Count1
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