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2D Structure
Also known as: 13957-31-8, Thiouridine, Uridine, 4-thio-, 4-thio-uridine, 1-((2r,3r,4s,5r)-3,4-dihydroxy-5-(hydroxymethyl)tetrahydrofuran-2-yl)-4-thioxo-3,4-dihydropyrimidin-2(1h)-one, U9tyq2r33j
Molecular Formula
C9H12N2O5S
Molecular Weight
260.27  g/mol
InChI Key
ZLOIGESWDJYCTF-XVFCMESISA-N
FDA UNII
U9TYQ2R33J

A photoactivable URIDINE analog that is used as an affinity label.
1 2D Structure

2D Structure

2 Identification
2.1 Computed Descriptors
2.1.1 IUPAC Name
1-[(2R,3R,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-4-sulfanylidenepyrimidin-2-one
2.1.2 InChI
InChI=1S/C9H12N2O5S/c12-3-4-6(13)7(14)8(16-4)11-2-1-5(17)10-9(11)15/h1-2,4,6-8,12-14H,3H2,(H,10,15,17)/t4-,6-,7-,8-/m1/s1
2.1.3 InChI Key
ZLOIGESWDJYCTF-XVFCMESISA-N
2.1.4 Canonical SMILES
C1=CN(C(=O)NC1=S)C2C(C(C(O2)CO)O)O
2.1.5 Isomeric SMILES
C1=CN(C(=O)NC1=S)[C@H]2[C@@H]([C@@H]([C@H](O2)CO)O)O
2.2 Other Identifiers
2.2.1 UNII
U9TYQ2R33J
2.3 Synonyms
2.3.1 MeSH Synonyms

1. 4 Thiouridine

2. Thiouridine

2.3.2 Depositor-Supplied Synonyms

1. 13957-31-8

2. Thiouridine

3. Uridine, 4-thio-

4. 4-thio-uridine

5. 1-((2r,3r,4s,5r)-3,4-dihydroxy-5-(hydroxymethyl)tetrahydrofuran-2-yl)-4-thioxo-3,4-dihydropyrimidin-2(1h)-one

6. U9tyq2r33j

7. 1-beta-d-ribofuranosyl-4-thiouracil

8. Mfcd00006538

9. 1-(beta-d-ribofuranosyl)-4-thioxo-3,4-dihydropyrimidin-2(1h)-one

10. S4u

11. Thiouridine (van)

12. Nsc-518132

13. 1-[(2r,3r,4s,5r)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-4-sulfanylidenepyrimidin-2-one

14. 4-thioribothymidine

15. Einecs 237-735-3

16. Nsc 518132

17. Unii-u9tyq2r33j

18. 4-thiouridine, >=98%

19. Schembl34577

20. Chebi:20480

21. Dtxsid30930508

22. Ex-a3667

23. Zinc13518039

24. Cs-w012509

25. Hy-w011793

26. As-56720

27. A51147

28. A855708

29. Q20890501

30. 1-[(2r,3r,4s,5r)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-4-sulfanylidene-1,2,3,4-tetrahydropyrimidin-2-one

31. 1-[(2r,3r,4s,5r)-3,4-dihydroxy-5-(hydroxymethyl)tetrahydrofuran-2-yl]-4-thioxo-pyrimidin-2-one

2.4 Create Date
2005-08-08
3 Chemical and Physical Properties
Molecular Weight 260.27 g/mol
Molecular Formula C9H12N2O5S
XLogP3-1.4
Hydrogen Bond Donor Count4
Hydrogen Bond Acceptor Count6
Rotatable Bond Count2
Exact Mass260.04669266 g/mol
Monoisotopic Mass260.04669266 g/mol
Topological Polar Surface Area134 Ų
Heavy Atom Count17
Formal Charge0
Complexity374
Isotope Atom Count0
Defined Atom Stereocenter Count4
Undefined Atom Stereocenter Count0
Defined Bond Stereocenter Count0
Undefined Bond Stereocenter Count0
Covalently Bonded Unit Count1
4 Pharmacology and Biochemistry
4.1 MeSH Pharmacological Classification

Affinity Labels

Analogs of those substrates or compounds which bind naturally at the active sites of proteins, enzymes, antibodies, steroids, or physiological receptors. These analogs form a stable covalent bond at the binding site, thereby acting as inhibitors of the proteins or steroids. (See all compounds classified as Affinity Labels.)


Antimetabolites

Drugs that are chemically similar to naturally occurring metabolites, but differ enough to interfere with normal metabolic pathways. (From AMA Drug Evaluations Annual, 1994, p2033) (See all compounds classified as Antimetabolites.)