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2D Structure
Also known as: 635-65-4, Hematoidin, Hemetoidin, Bilirubin ix-alpha, Cholerythrin, Principal bile pigment
Molecular Formula
C33H36N4O6
Molecular Weight
584.7  g/mol
InChI Key
BPYKTIZUTYGOLE-IFADSCNNSA-N
FDA UNII
RFM9X3LJ49

A bile pigment that is a degradation product of HEME.
1 2D Structure

2D Structure

2 Identification
2.1 Computed Descriptors
2.1.1 IUPAC Name
3-[2-[[3-(2-carboxyethyl)-5-[(Z)-(3-ethenyl-4-methyl-5-oxopyrrol-2-ylidene)methyl]-4-methyl-1H-pyrrol-2-yl]methyl]-5-[(Z)-(4-ethenyl-3-methyl-5-oxopyrrol-2-ylidene)methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid
2.1.2 InChI
InChI=1S/C33H36N4O6/c1-7-20-19(6)32(42)37-27(20)14-25-18(5)23(10-12-31(40)41)29(35-25)15-28-22(9-11-30(38)39)17(4)24(34-28)13-26-16(3)21(8-2)33(43)36-26/h7-8,13-14,34-35H,1-2,9-12,15H2,3-6H3,(H,36,43)(H,37,42)(H,38,39)(H,40,41)/b26-13-,27-14-
2.1.3 InChI Key
BPYKTIZUTYGOLE-IFADSCNNSA-N
2.1.4 Canonical SMILES
CC1=C(NC(=C1CCC(=O)O)CC2=C(C(=C(N2)C=C3C(=C(C(=O)N3)C)C=C)C)CCC(=O)O)C=C4C(=C(C(=O)N4)C=C)C
2.1.5 Isomeric SMILES
CC1=C(NC(=C1CCC(=O)O)CC2=C(C(=C(N2)/C=C\3/C(=C(C(=O)N3)C)C=C)C)CCC(=O)O)/C=C\4/C(=C(C(=O)N4)C=C)C
2.2 Other Identifiers
2.2.1 UNII
RFM9X3LJ49
2.3 Synonyms
2.3.1 MeSH Synonyms

1. Bilirubin Ix Alpha

2. Bilirubin, (15e)-isomer

3. Bilirubin, (4e)-isomer

4. Bilirubin, (4e,15e)-isomer

5. Bilirubin, Calcium Salt

6. Bilirubin, Disodium Salt

7. Bilirubin, Monosodium Salt

8. Bilirubinate, Calcium

9. Calcium Bilirubinate

10. Calcium Salt Bilirubin

11. Delta Bilirubin

12. Delta-bilirubin

13. Disodium Salt Bilirubin

14. Hematoidin

15. Monosodium Salt Bilirubin

16. Salt Bilirubin, Calcium

2.3.2 Depositor-Supplied Synonyms

1. 635-65-4

2. Hematoidin

3. Hemetoidin

4. Bilirubin Ix-alpha

5. Cholerythrin

6. Principal Bile Pigment

7. Bilibubin

8. Bilirubin Ix.alpha.

9. 3-[2-[[3-(2-carboxyethyl)-5-[(z)-(3-ethenyl-4-methyl-5-oxopyrrol-2-ylidene)methyl]-4-methyl-1h-pyrrol-2-yl]methyl]-5-[(z)-(4-ethenyl-3-methyl-5-oxopyrrol-2-ylidene)methyl]-4-methyl-1h-pyrrol-3-yl]propanoic Acid

10. Bilirubin Ixalpha

11. Disodium Bilirubinate Ixalpha

12. Rfm9x3lj49

13. 21h-biline-8,12-dipropanoic Acid, 2,17-diethenyl-1,10,19,22,23,24-hexahydro-3,7,13,18-tetramethyl-1,19-dioxo-

14. (4z,15z)-bilirubin Ix.alpha.

15. Chebi:16990

16. Nsc-26685

17. Pheophytin

18. Biline-8,12-dipropionic Acid, 1,10,19,22,23,24-hexahydro-2,7,13,17-tetramethyl-1,19-dioxo-3,18-divinyl-

19. 93891-87-3

20. 1,10,19,22,23,24-hexahydro-2,7,13,17-tetramethyl-1,19-dioxo-3,18-divinylbiline-8,12-dipropionic Acid

21. 2,17-diethenyl-1,10,19,22,23,24-hexahydro-3,7,13,18-tetramethyl-1,19-dioxo-21h-biline-8,12-dipropanoic Acid

22. 3-(2-((3-(2-carboxyethyl)-4-methyl-5-((z)-(3-methyl-5-oxo-4-vinyl-1h-pyrrol-2(5h)-ylidene)methyl)-1h-pyrrol-2-yl)methyl)-4-methyl-5-((z)-(4-methyl-5-oxo-3-vinyl-1h-pyrrol-2(5h)-ylidene)methyl)-1h-pyrrol-3-yl)propanoic Acid

23. Calcium Bilirubinate

24. Basinite

25. Einecs 211-239-7

26. Bilirubin Ix Alpha

27. 3-{2-({3-(2-carboxyethyl)-4-methyl-5-[(z)-(3-methyl-5-oxo-4-vinyl-1,5-dihydro-2h-pyrrol-2-ylidene)methyl]-1h-pyrrol-2-yl}methyl)-4-methyl-5-[(z)-(4-methyl-5-ox

28. Mfcd00005499

29. Nsc 26685

30. Unii-rfm9x3lj49

31. Brn 0074376

32. Bilirubin Test

33. Ai3-23078

34. Ccris 9347

35. Bilirubin-ixalpha

36. Bilirubin(z,z)

37. Bilirubin,(s)

38. 3-[5-[(z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-2-[[5-[(z)-(3-ethenyl-4-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1h-pyrrol-2-yl]methyl]-4-methyl-1h-pyrrol-3-yl]propanoic Acid

39. Einecs 299-468-9

40. Bilirubin, 98%

41. (z,z)-bilirubin Ixa

42. Bilirubin [mi]

43. Spectrum5_000410

44. Bmse000627

45. Bilirubin [who-dd]

46. Schembl19065

47. (4z,15z)-bilirubin Ixa

48. Bspbio_002531

49. 5-26-15-00523 (beilstein Handbook Reference)

50. Spectrum1500857

51. Bilirubin Test [vandf]

52. Chembl501680

53. Gtpl4577

54. Schembl5086205

55. Dtxsid8060905

56. S00334a

57. Albb-030171

58. Bcp13520

59. Hy-n0323

60. Bdbm50442897

61. Ccg-38548

62. Hsci1_000394

63. S5116

64. Stl564421

65. Zinc18007499

66. Akos015895627

67. Bilirubin, Purum, >=95.0% (uv)

68. Sdccgmls-0066651.p001

69. Ncgc00095645-01

70. 18422-02-1

71. Ac-20194

72. Ac-34137

73. Disodium 1,10,19,22,23,24-hexahydro-3,7,13,18-tetramethyl-1,19-dioxo-2,17-divinyl-21h-biline-8,12-dipropionate

74. Cs-0008888

75. B-2500

76. B-2501

77. C00486

78. Methyl-5-((z)-(4-methyl-5-oxo-3-vinyl-1h-

79. 3-(2-((3-(2-carboxyethyl)-4-methyl-5-((z)

80. 635b654

81. Bilirubin, >=98% (emm/453 = 60), Powder

82. Q104219

83. Sr-05000002757

84. Sr-05000002757-1

85. Pyrrol-2(5h)-ylidene)methyl)-1h-pyrrol-3-yl)propanoic Acid

86. 1,3,6,7-tetramethyl-4,5-dicarboxyethyl-2,8-divinyl-(b-13)-dihydrobilenone

87. 1,10,19,22,23,24-hexahydro-2,7,13,17-tetramethyl-1,19-dioxo-3,18-divinyl-biline-8,12-dipropionate

88. 1,10,19,22,23,24-hexahydro-2,7,13,17-tetramethyl-1,19-dioxo-3,18-divinyl-biline-8,12-dipropionic Acid

89. 2,17-diethenyl-1,10,19,22,23,24-hexahydro-3,7,13,18-tetramethyl-1,19-dioxo-21h-biline-8,12-dipropanoate

90. 2,7,13,17-tetramethyl-1,19-dioxo-3,18-divinyl-1,10,19,22,23,24-hexahydro-21h-biline-8,12-dipropanoic Acid

91. 21h-biline-8,12-dipropanoic Acid, 2,17-diethenyl-1,10,19,22,23,24-hexahydro-3,7,13,18-tetramethyl-1,19-dioxo-, Calcium Salt

92. 21h-biline-8,12-dipropanoic Acid, 2,17-diethenyl-1,10,19,22,23,24-hexahydro-3,7,13,18-tetramethyl-1,19-dioxo-, Disodium Salt

93. 21h-biline-8,12-dipropanoic Acid,2,17-diethenyl-1,10,19,22,23,24-hexahydro-3,7,13,18-tetramethyl-1,19-dioxo-

94. 3,18-diethenyl-2,7,13,17-tetramethyl-1,19-dioxo-1,10,19,22,23,24-hexahydro-21h-biline-8,12-dipropanoic Acid

95. 3-(2-((3-(2-carboxyethyl)-4-methyl-5-((3-methyl-5-oxo-4-vinyl-1,5-dihydro-2h-pyrrol-2-ylidene)methyl)-1h-pyrrol-2-yl)methyl)-4-methyl-5-((4-methyl-5-oxo-3-vinyl-1,5-dihydro-2h-pyrrol-2-ylidene)methyl)-1h-pyrrol-3-yl)propanoate

96. 3-(2-((3-(2-carboxyethyl)-4-methyl-5-((3-methyl-5-oxo-4-vinyl-1,5-dihydro-2h-pyrrol-2-ylidene)methyl)-1h-pyrrol-2-yl)methyl)-4-methyl-5-((4-methyl-5-oxo-3-vinyl-1,5-dihydro-2h-pyrrol-2-ylidene)methyl)-1h-pyrrol-3-yl)propanoic Acid

97. 3-(2-((3-(2-carboxyethyl)-4-methyl-5-((z)-(3-methyl-5-oxo-4-vinyl-1h-pyrrol-2(5h)-ylidene)methyl)-1h-pyrrol-2-yl)methyl)-4-methyl-5-((z)-(4-methyl-5-oxo-3-vinyl-1h-pyrrol-2(5h)-ylidene)methyl)-1h-pyrr

98. 3-(2-((3-(2-carboxyethyl)-4-methyl-5-((z)-(3-methyl-5-oxo-4-vinyl-1h-pyrrol-2(5h)-ylidene)methyl)-1h-pyrrol-2-yl)methyl)-4-methyl-5-((z)-(4-methyl-5-oxo-3-vinyl-1h-pyrrol-2(5h)-ylidene)methyl)-1h-pyrrol-3-yl)propanoicacid

99. 3-(2-((3-(2-carboxyethyl)-4-methyl-5-[(z)-(3-methyl-5-oxo-4-vinyl-1,5-dihydro-2h-pyrrol-2-ylidene)methyl]-1h-pyrrol-2-yl)methyl)-4-methyl-5-[(z)-(4-methyl-5-oxo-3-vinyl-1,5-dihydro-2h-pyrrol-2-ylidene

100. 3-(2-((3-(2-carboxyethyl)-4-methyl-5-[(z)-(3-methyl-5-oxo-4-vinyl-1,5-dihydro-2h-pyrrol-2-ylidene)methyl]-1h-pyrrol-2-yl)methyl)-4-methyl-5-[(z)-(4-methyl-5-oxo-3-vinyl-1,5-dihydro-2h-pyrrol-2-ylidene #

101. 3-(2-{[3-(2-carboxyethyl)-5-{[(2z)-3-ethenyl-4-methyl-5-oxo-2,5-dihydro-1h-pyrrol-2-ylidene]methyl}-4-methyl-1h-pyrrol-2-yl]methyl}-5-{[(2z)-4-ethenyl-3-methyl-5-oxo-2,5-dihydro-1h-pyrrol-2-ylidene]methyl}-4-methyl-1h-pyrrol-3-yl)propanoic Acid

102. 3-(2-{[3-(2-carboxyethyl)-5-{[(2z)-4-ethenyl-3-methyl-5-oxo-2,5-dihydro-1h-pyrrol-2-ylidene]methyl}-4-methyl-1h-pyrrol-2-yl]methyl}-5-{[(2z)-3-ethenyl-4-methyl-5-oxo-2,5-dihydro-1h-pyrrol-2-ylidene]methyl}-4-methyl-1h-pyrrol-3-yl)propanoic Acid

103. 3-[2-[[3-(2-carboxyethyl)-5-[(3-ethenyl-4-methyl-5-oxo-pyrrol-2-ylidene)methyl]-4-methyl-1h-pyrrol-2-yl]methyl]-5-[(4-ethenyl-3-methyl-5-oxo-pyrrol-2-ylidene)methyl]-4-methyl-1h-pyrrol-3-yl]propanoate

104. 3-[2-[[3-(2-carboxyethyl)-5-[(3-ethenyl-4-methyl-5-oxo-pyrrol-2-ylidene)methyl]-4-methyl-1h-pyrrol-2-yl]methyl]-5-[(4-ethenyl-3-methyl-5-oxo-pyrrol-2-ylidene)methyl]-4-methyl-1h-pyrrol-3-yl]propanoic Acid

105. 3-[2-[[3-(2-carboxyethyl)-5-[(z)-(3-ethenyl-4-methyl-5-oxo-pyrrol-2-ylidene)methyl]-4-methyl-1h-pyrrol-2-yl]methyl]-5-[(z)-(4-ethenyl-3-methyl-5-oxo-pyrrol-2-ylidene)methyl]-4-methyl-1h-pyrrol-3-yl]propanoate

106. 3-[2-[[3-(2-carboxyethyl)-5-[(z)-(3-ethenyl-4-methyl-5-oxo-pyrrol-2-ylidene)methyl]-4-methyl-1h-pyrrol-2-yl]methyl]-5-[(z)-(4-ethenyl-3-methyl-5-oxo-pyrrol-2-ylidene)methyl]-4-methyl-1h-pyrrol-3-yl]propanoic Acid

107. 3-[2-[3-(2-carboxy-ethyl)-4-methyl-5-(3-methyl-5-oxo-4-vinyl-1,5-dihydro-pyrrol-2-ylidenemethyl)-1h-pyrrol-2-ylmethyl]-4-methyl-5-(4-methyl-5-oxo-3-vinyl-1,5-dihydro-pyrrol-2-ylidenemethyl)-1h-pyrrol-

108. 3q9

109. 8,12-bis(2-carboxyethyl)-2,7,13,17-tetramethyl-3,18-divinylbiladiene-ac-1,19(21h,24h)-dione

110. Bilirubin: 21h-biline-8,12-dipropanoicacid,2,17-diethenyl-1,10,19,22,23,24-hexahydro-3,7,13,18-tetramethyl-1,19-dioxo-,

2.4 Create Date
2004-09-16
3 Chemical and Physical Properties
Molecular Weight 584.7 g/mol
Molecular Formula C33H36N4O6
XLogP32.9
Hydrogen Bond Donor Count6
Hydrogen Bond Acceptor Count6
Rotatable Bond Count12
Exact Mass584.26348488 g/mol
Monoisotopic Mass584.26348488 g/mol
Topological Polar Surface Area164 Ų
Heavy Atom Count43
Formal Charge0
Complexity1340
Isotope Atom Count0
Defined Atom Stereocenter Count0
Undefined Atom Stereocenter Count0
Defined Bond Stereocenter Count2
Undefined Bond Stereocenter Count0
Covalently Bonded Unit Count1
4 Pharmacology and Biochemistry
4.1 MeSH Pharmacological Classification

Antioxidants

Naturally occurring or synthetic substances that inhibit or retard oxidation reactions. They counteract the damaging effects of oxidation in animal tissues. (See all compounds classified as Antioxidants.)


4.2 Metabolism/Metabolites

Bilirubin has known human metabolites that include 6-[3-[2-[[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxopyrrol-2-ylidene)methyl]-4-methyl-1H-pyrrol-2-yl]methyl]-5-[(Z)-(3-ethenyl-4-methyl-5-oxopyrrol-2-ylidene)methyl]-4-methyl-1H-pyrrol-3-yl]propanoyloxy]-3,4,5-trihydroxyoxane-2-carboxylic acid and Bilirubin acyl-b-D-glucuronide (mixture).

S73 | METXBIODB | Metabolite Reaction Database from BioTransformer | DOI:10.5281/zenodo.4056560